Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015953606.1_cds_XP_016492697.1_82873
CDS Infomation

[gene=LOC107812175] [db_xref=GeneID:107812175] [protein=shaggy-related protein kinase epsilon-like] [protein_id=XP_016492697.1] [location=complement(join(2444..2505,2591..2693,2919..3002,3154..3249,3355..3405,3727..3867,3943..3999,4151..4225,4355..4627,4737..4796,4897..4989,5091..5345,5891..5950))] [gbkey=CDS]
Sequence

ATGAATGTGATGCGACGCCTCAAGAGCATTGCTTCTGGTCGATCTTCCGTTTCGGATCCT
GGTGGGGATTTTAGCCTAAAGAGAGTAAAGGTTGAGCAGGAAGTAGATCACAGGGTCGAT
GGCGAAACTCAATCAGAAGAGCAATGTACTATAGCTCCTAAACAGGATGTGACTTCTACG
TCTAGTGAAAGTACTACTACTACATTGAATGTTGATACTAGACCAGAAAAATCTGGATAT
GAGGAGCTTCCAAAGGAAATGAATGAAATGAAAATTAGAGACGACAAGACTAATGGACGC
GAGGATGACATAAAGGATATGGAGCCTGCTGTTGTTAGTGGTAATGGAACAGAAACAGGT
CAGATAATCGTGACTACTTTGAGTGGTCGAAATGGACAGCAGAAAAAGACGCTGTCTTAC
ATGGCTGAACGTGTGGTGGGCACGGGTTCATTTGGAGTTGTATTTCAGGCTAAGTGCCTT
GAAACAGGTGACTCTGTCGCAATAAAGAAGGTTTTACAGGATAGGAGATACAAGAACAGG
GAACTACAGATTGTGCGCATACTTGATCATCCTAATGTTGTTCACTTGAGACACTGTTTC
TATTCTACTACTGAGAAGAATGAGGTTTACCTTAACCTTGTTTTGGAGTATGTGTCTGAA
ACTGTTTACCGAGTTTCAAGGCACTACAGCCGAGTGAACCATCACATGCCCATCATATAT
GTTCAACTATACACTTACCAGCTATGTCGGGCTCTGAATTACATGCACAACGTAACTGGC
GTATGTCACCGTGATATTAAACCTCAGAATCTTTTGGTTAATCCCCACACTCATCAGTTA
AAGATATGTGATTTTGGAAGTGCAAAGATGTTGGTGCCTGGGGAGCCCAATATATCCTAC
ATTTGTTCTCGGTATTATAGGGCACCTGAATTGATCTTTGGGGCTACAGAATACACAAAT
GCAATTGATATGTGGTCAGCTGGTTGCGTTTTCGCTGAGCTGCTTTTAGGACAGCCTCTT
TTCCCTGGAGAAAGTGGCGTCGATCAGCTGGTGGAGATCATCAAGATTTTGGGGACACCA
ACTAGAGAGGAAATTAGGTGCATGAATCCAAACTATAAAGAGTTCAAGTTTCCTCAAATG
AAAGCTCATCCATGGCATAAGATATTTAATAGAAGAATACCTCCTGAAGCAGTAGATTTG
GCATCAAGGCTGCTCCAGTATTCTCCAACTCTACGTTGTACTGCTTTGGAGGCATGTGCA
CACCCTTTCTTTGATGCTCTGAGGGAACCAAATGCTTGCTTGCCAAATGGGCGACCTTTG
CCACCTCTATTCAATTTTACACCTCAAGAACTTTCTGGTGCACCTACTGAACTGAGACAA
CGCCTCATTCCTGAGCACATGAGAAAATGA

Peptide Sequence

PEP ID

XP_016492697.1
PEP Infomation

PREDICTED: shaggy-related protein kinase epsilon-like [Nicotiana tabacum]
Sequence

MNVMRRLKSIASGRSSVSDPGGDFSLKRVKVEQEVDHRVDGETQSEEQCTIAPKQDVTST
SSESTTTTLNVDTRPEKSGYEELPKEMNEMKIRDDKTNGREDDIKDMEPAVVSGNGTETG
QIIVTTLSGRNGQQKKTLSYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDRRYKNR
ELQIVRILDHPNVVHLRHCFYSTTEKNEVYLNLVLEYVSETVYRVSRHYSRVNHHMPIIY
VQLYTYQLCRALNYMHNVTGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPGEPNISY
ICSRYYRAPELIFGATEYTNAIDMWSAGCVFAELLLGQPLFPGESGVDQLVEIIKILGTP
TREEIRCMNPNYKEFKFPQMKAHPWHKIFNRRIPPEAVDLASRLLQYSPTLRCTALEACA
HPFFDALREPNACLPNGRPLPPLFNFTPQELSGAPTELRQRLIPEHMRK

Transcript Sequence

Gene sequence data has not been registered.